What does ctmd stand for

Does your input dcd file contain the protein? The input dcd file should contain only the Phosphate beads. My model contains a protein ion channel embedded in a lipid bilayer. As emphasized in the software manual, I have used the dcd file which only contain the Phosphate molecules of the lipid as an input file.

Then the program prompts first for the number of lipids and a name for the output. However, as soon as I enter these info, the program crashes without any error or output. I do have to open CTMD several time to be able to input my file before crashing but even when I can input the dcd file I still have the above-mentioned issue.

Hi Navid, could you please email me the log file? Windows 7 is fine, but is there a chance that this could be a memory issue with your computer?

The final results are two values of G. Then, I am not sure if the delta G value i have to use is just the value corresponding to the deformed system or, maybe the difference between this one and the other corresponding to the flat membrane.

In turn, i think the flat membrane value is the energy of an unmeaningfull membrane which does not account for these spontaneous curvature and it is sometimes greater then the penalty of the deformed system. Then the membrane would deform in this way in the absence of inclusion, wouldn't it? After trying to explain the mess in my brain, could you help me to understand which value should I consider as the correct deformation energy penalty?

Your email address will not be published. Click to enlarge and learn more. September 14, at pm. Sayan Mondal says:. September 15, at am. Markus says:. February 1, at pm.

Sayan says:. Medical » Diseases. Medical -- and more We're doing our best to make sure our content is useful, accurate and safe. If by any chance you spot an inappropriate comment while navigating through our website please use this form to let us know, and we'll take care of it shortly.

Forgot your password? Retrieve it. Abbreviation » Term. Term » Abbreviation. Word in Term. Term » Abbr. Filter by: Select category from list Couldn't find the full form or full meaning of CTMD? World Conference on Human Rights, Vienna, Turn on more accessible mode. Turn off more accessible mode.